Program | Type | Reference |
---|---|---|
General Package | Biyani et al 2017 | |
Bfactor correction | Fernandez et al 2008 | |
CTF correction | Mallick et al 2005 | |
CTF correction | Rohou & Grigorieff 2015 | |
CTF correction | Fernandez & Crowther 2006 | |
data acquisition | Suloway et al 2005 | |
data acquisition, tomography | Zheng et al 2004 | |
denoising | Fernandez & Li 2003 | |
reconstruction | Heymann 2018 | |
reconstruction | reconstruction | Punjani et al 2017 |
reconstruction | Bell et al 2018 | |
reconstruction | ||
reconstruction | ||
reconstruction | Schenk et al 2013 | |
reconstruction | Burnley et al 2017 | |
reconstruction | Reboul et al 2018 | |
reconstruction | Behrmann et al 2012 | |
reconstruction | Leith et al 2012 | |
reconstruction | ||
reconstruction | Moriya et al 2017 | |
reconstruction | de la Rosa-Treví et al 2013 | |
helical | Egelman 2010 | |
helical | ||
helical | Metlagel et al 2007 | |
helical | Desfosses et al 2014 | |
icosahedral | Yan et al 2007 | |
map conversion | ||
modelling | Garzon et al 2007 | |
modelling, visualization | Petterson et al 2004 | |
modelling, visualization | Brown et al 2015 | |
modelling | Wang & Schroeder 2012 | |
modelling | Rossmann et al 2001 | |
modelling | Joseph et al 2016 | |
modelling | Baker et al 2012 | |
modelling | Lopéz-Banco & Chacon 2013 | |
modelling | Trabuco et al 2009 | modelling | Tama et al 2004 |
modelling | Suhre et al 2006 | |
modelling | Afonine et al 2018 | |
modelling | Brown et al 2015 | |
modelling | Wang et al 2016 | |
modelling | Kovacs et al 2018 | |
modelling, model validation | Farabella et al 2015 | |
modelling, visuallization | model validation | Barad et al 2015 |
model validation | Williams et al 2018 | |
particle selection | ||
particle selection | Chen & Grigorieff 2007 | |
resolution estimation | ||
resolution estimation | Sousa & Grigorieff 2007 | |
single particle | Lyumkis et al 2013 | |
single particle | ||
single particle | Scheres 2012 | |
tomography | Castano-Diez et al 2012 | |
tomography | ||
tomography | Mastronarde & Held 2017 | |
tomography | Winkler & Taylor 2006 | |
data acquisition, tomography | Mastronarde 2005 | |
tomography | Nickell et al 2005 | |
visualization | ||
visualization | McNicholas et al 2011 | |
visualization | ||
workflow | Lander et al 2009 | |
workflow | ||
movie frame alignment | Zheng et al 2017 | |
particle picking | ||
CTF correction | ||
Local Resolution Estimation | Kucukelbir et al 2014 | |
movie frame alignment | Grant & Grigorieff 2015 | |
modelling server | Tiemann et al 2018 | |
modelling server | Zundert et al 2017 | |
workflow scripts |